API Reference

Bindings to CoMSA, a compressor for multiple sequence alignments.

MSA

pycomsa.MSA

A multiple sequence alignment.

Readers

pycomsa.FastaReader	A reader for CoMSA-compressed FASTA files.
pycomsa.StockholmReader	A reader for CoMSA-compressed Stockholm files.

Writers

pycomsa.StockholmWriter

A writer for CoMSA-compressed Stockholm files.

Functions

pycomsa.open

Open a file for reading or for writing with CoMSA.