API Reference
==============

.. currentmodule:: pycomsa

.. automodule:: pycomsa

MSA
---

.. autosummary::
    :nosignatures:

    pycomsa.MSA

.. toctree::
    :maxdepth: 1
    :hidden:

    msa


Readers
-------

.. autosummary::
    :nosignatures:

    pycomsa.FastaReader
    pycomsa.StockholmReader


.. toctree::
    :maxdepth: 1
    :hidden:

    readers


Writers
-------

.. autosummary::
    :nosignatures:

    pycomsa.StockholmWriter


.. toctree::
    :maxdepth: 1
    :hidden:

    writers


Functions
---------

.. autosummary::
    :nosignatures:

    pycomsa.open


.. toctree::
    :maxdepth: 1
    :hidden:

    functions